Protein ZmABI10
ZmABI10 is a protein in the ABI3-VP1 family.
Information
TF Name: ZmABI10
Species: Maize
TF Family: ABI3-VP1
Gene Name(Synonym): ABI10
Uniprot ID: A0A1D6PDQ1
Subgenome: 2

Protein ZmABI10

ZmABI10 is a protein in the ABI3-VP1 family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d026694DAPseq no logo sequence fimo position
Zm00001d026694DAPseq no logo sequence fimo position
Zm00001d026694ChIPseq no logo sequence fimo position
Zm00001d026694PChIPseq no logo sequence fimo position

Interactions where ZmABI10 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmABI10 is the target  
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There are 25 protein-dna interactions that fit this criteria. download excel sheet

Zm00001d026694_T001 from maize genome v4

Amino Acid Sequence
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MATEPALPQGHGDGDSIVDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQHLLAPLPASHRFPCTCTVTDVSLGAEDRTD
EVFAKISLRPGPAAASRPEPGPGPGSSNSTRQGLSYFVNELLHRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMR
DTRGKPWQFHHIYVVKIRQHRLTAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRRKATRTSWRPRASPPWAGPSRSPT
SRDRPPWSSSSRTARWIARSPPAGNEARRLEDENKQRSVWVDGHVVKANRQNIWRMLEIHWWGDSPASASPPSRAMSRFV
NVWQVQRVAWFLPRPYYWRVRKKPGPGHEHDIGGATNSCNAKPLSC

MATEPALPQGHGDGDSIVDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQHLLAPLPASHRFPCTCTVTDVSLGAEDRTD
EVFAKISLRPGPAAASRPEPGPGPGSSNSTRQGLSYFVNELLHRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMR
DTRGKPWQFHHIYVVKIRQHRLTAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRRKATRTSWRPRASPPWAGPSRSPT
SRDRPPWSSSSRTARWIARSPPAGNEARRLEDENKQRSVWVDGHVVKANRQNIWRMLEIHWWGDSPASASPPSRAMSRFV
NVWQVQRVAWFLPRPYYWRVRKKPGPGHEHDIGGATNSCNAKPLSC

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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ATGGCGACCGAGCCAGCGCTTCCCC...


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